Package | Description |
---|---|
fr.profi.mzdb.io.reader.table | |
fr.profi.mzdb.io.writer.mgf | |
fr.profi.mzdb.model |
Modifier and Type | Method and Description |
---|---|
static Precursor |
ParamTreeParser.parsePrecursor(String precursorAsStr) |
Modifier and Type | Method and Description |
---|---|
protected double |
DefaultPrecursorComputer.extractPrecMz(MzDbReader mzDbReader,
Precursor precursor,
double precMz,
SpectrumHeader spectrumHeader,
float timeTol)
Detects isotopic pattern in the survey and return the most probable mono-isotopic m/z value
|
protected Double |
DefaultPrecursorComputer.refinePrecMz(MzDbReader mzDbReader,
Precursor precursor,
double precMz,
double mzTolPPM,
float time,
float timeTol)
Refines the provided target m/z value by looking at the nearest value in the survey.
|
Modifier and Type | Field and Description |
---|---|
protected Precursor |
SpectrumHeader.precursor
The precursor: contains selected ions list
|
Modifier and Type | Method and Description |
---|---|
Precursor |
SpectrumHeader.getPrecursor() |
Modifier and Type | Method and Description |
---|---|
void |
SpectrumHeader.setPrecursor(Precursor precursor) |
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