fr.profi.mzdb.io.reader.cache

Class MzDbEntityCache

java.lang.Object

fr.profi.mzdb.io.reader.cache.MzDbEntityCache

public class MzDbEntityCache
extends Object

Author:

David Bouyssie

Field Summary

Fields

Modifier and Type	Field and Description
protected Map<Integer,DataEncoding>	dataEncodingById
protected Map<Long,DataEncoding>	dataEncodingBySpectrumId
protected Map<Long,SpectrumHeader>	ms1SpectrumHeaderById
protected SpectrumHeader[]	ms1SpectrumHeaders
protected Map<Long,SpectrumHeader>	ms2SpectrumHeaderById
protected SpectrumHeader[]	ms2SpectrumHeaders
protected Map<Long,SpectrumHeader>	ms3SpectrumHeaderById
protected SpectrumHeader[]	ms3SpectrumHeaders
protected Map<Integer,RunSliceHeader>	runSliceHeaderById
protected RunSliceHeader[]	runSliceHeaders
protected Map<Long,SpectrumHeader>	spectrumHeaderById
protected SpectrumHeader[]	spectrumHeaders
protected Map<Integer,ArrayList<Long>>	spectrumIdsByTimeIndex
protected Map<Long,Float>	spectrumTimeById

Constructor Summary

Constructors

Constructor and Description
MzDbEntityCache()

Method Summary

Modifier and Type	Method and Description
Map<Long,DataEncoding>	getDataEncodingBySpectrumId()
Map<Long,SpectrumHeader>	getMs1SpectrumHeaderById()
SpectrumHeader[]	getMs1SpectrumHeaders()
Map<Long,SpectrumHeader>	getMs2SpectrumHeaderById()
SpectrumHeader[]	getMs2SpectrumHeaders()
Map<Integer,RunSliceHeader>	getRunSliceHeaderById()
RunSliceHeader[]	getRunSliceHeaders()
Map<Long,Float>	getSpectrumTimeById()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

ms1SpectrumHeaders

protected SpectrumHeader[] ms1SpectrumHeaders

ms1SpectrumHeaderById

protected Map<Long,SpectrumHeader> ms1SpectrumHeaderById

ms2SpectrumHeaders

protected SpectrumHeader[] ms2SpectrumHeaders

ms2SpectrumHeaderById

protected Map<Long,SpectrumHeader> ms2SpectrumHeaderById

ms3SpectrumHeaders

protected SpectrumHeader[] ms3SpectrumHeaders

ms3SpectrumHeaderById

protected Map<Long,SpectrumHeader> ms3SpectrumHeaderById

spectrumHeaders

protected SpectrumHeader[] spectrumHeaders

spectrumHeaderById

protected Map<Long,SpectrumHeader> spectrumHeaderById

spectrumTimeById

protected Map<Long,Float> spectrumTimeById

spectrumIdsByTimeIndex

protected Map<Integer,ArrayList<Long>> spectrumIdsByTimeIndex

dataEncodingById

protected Map<Integer,DataEncoding> dataEncodingById

dataEncodingBySpectrumId

protected Map<Long,DataEncoding> dataEncodingBySpectrumId

runSliceHeaders

protected RunSliceHeader[] runSliceHeaders

runSliceHeaderById

protected Map<Integer,RunSliceHeader> runSliceHeaderById

Constructor Detail

MzDbEntityCache

public MzDbEntityCache()

Method Detail

getMs1SpectrumHeaders

public SpectrumHeader[] getMs1SpectrumHeaders()

getMs1SpectrumHeaderById

public Map<Long,SpectrumHeader> getMs1SpectrumHeaderById()

getMs2SpectrumHeaders

public SpectrumHeader[] getMs2SpectrumHeaders()

getMs2SpectrumHeaderById

public Map<Long,SpectrumHeader> getMs2SpectrumHeaderById()

getSpectrumTimeById

public Map<Long,Float> getSpectrumTimeById()

getDataEncodingBySpectrumId

public Map<Long,DataEncoding> getDataEncodingBySpectrumId()

getRunSliceHeaders

public RunSliceHeader[] getRunSliceHeaders()

getRunSliceHeaderById

public Map<Integer,RunSliceHeader> getRunSliceHeaderById()