fr.profi.mzdb.io.reader.cache

Class DataEncodingReader

java.lang.Object

fr.profi.mzdb.io.reader.cache.MzDbEntityCacheContainer

fr.profi.mzdb.io.reader.cache.AbstractDataEncodingReader

fr.profi.mzdb.io.reader.cache.DataEncodingReader

public class DataEncodingReader
extends AbstractDataEncodingReader

The Class DataEncodingReader.

Author:

David Bouyssie

Constructor Summary

Constructors

Constructor and Description
DataEncodingReader(MzDbReader mzDbReader) Instantiates a new data encoding reader.

Method Summary

Modifier and Type	Method and Description
DataEncoding	getDataEncoding(int dataEncodingId) Gets the data encoding.
Map<Integer,DataEncoding>	getDataEncodingById() Gets the data encoding by id.
Map<Long,DataEncoding>	getDataEncodingBySpectrumId() Gets the data encoding by spectrum id.
DataEncoding[]	getDataEncodings() Gets the data encodings.
MzDbReader	getMzDbReader() specialized getter
DataEncoding	getSpectrumDataEncoding(long spectrumId) Gets the spectrum data encoding.

Methods inherited from class fr.profi.mzdb.io.reader.cache.AbstractDataEncodingReader

getDataEncoding, getDataEncodingById, getDataEncodingBySpectrumId, getDataEncodings, getSpectrumDataEncoding

Methods inherited from class fr.profi.mzdb.io.reader.cache.MzDbEntityCacheContainer

getEntityCache

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

DataEncodingReader

public DataEncodingReader(MzDbReader mzDbReader)
                   throws com.almworks.sqlite4java.SQLiteException

Instantiates a new data encoding reader.

Parameters:

mzDbReader - the mz db reader

Throws:

com.almworks.sqlite4java.SQLiteException - the sQ lite exception

Method Detail

getMzDbReader

public MzDbReader getMzDbReader()

specialized getter

Specified by:

getMzDbReader in class MzDbEntityCacheContainer

Returns:

reader

getDataEncoding

public DataEncoding getDataEncoding(int dataEncodingId)
                             throws com.almworks.sqlite4java.SQLiteException

Gets the data encoding.

Parameters:

dataEncodingId - the data encoding id

Returns:

the data encoding

Throws:

com.almworks.sqlite4java.SQLiteException - the sQ lite exception

getDataEncodings

public DataEncoding[] getDataEncodings()
                                throws com.almworks.sqlite4java.SQLiteException

Gets the data encodings.

Returns:

the data encodings

Throws:

com.almworks.sqlite4java.SQLiteException - the sQ lite exception

getDataEncodingById

public Map<Integer,DataEncoding> getDataEncodingById()
                                              throws com.almworks.sqlite4java.SQLiteException

Gets the data encoding by id.

Returns:

the data encoding by id

Throws:

com.almworks.sqlite4java.SQLiteException - the sQ lite exception

getDataEncodingBySpectrumId

public Map<Long,DataEncoding> getDataEncodingBySpectrumId()
                                                   throws com.almworks.sqlite4java.SQLiteException

Gets the data encoding by spectrum id.

Returns:

the data encoding by spectrum id

Throws:

com.almworks.sqlite4java.SQLiteException - the sQ lite exception

getSpectrumDataEncoding

public DataEncoding getSpectrumDataEncoding(long spectrumId)
                                     throws com.almworks.sqlite4java.SQLiteException

Gets the spectrum data encoding.

Parameters:

spectrumId - the spectrum id

Returns:

the spectrum data encoding

Throws:

com.almworks.sqlite4java.SQLiteException - the sQ lite exception