fr.profi.mzdb.model

Class Spectrum

java.lang.Object

fr.profi.mzdb.model.Spectrum

Direct Known Subclasses:

SpectrumSlice

public class Spectrum
extends Object

The Class Spectrum.

Author:

David Bouyssie

Field Summary

Fields

Modifier and Type	Field and Description
protected SpectrumHeader	header The header.
protected SpectrumData	spectrumData The spectrum data.

Constructor Summary

Constructors

Constructor and Description
Spectrum(SpectrumHeader header, SpectrumData spectrumData) Instantiates a new spectrum.

Method Summary

Modifier and Type	Method and Description
SpectrumData	getData() Gets the data.
SpectrumHeader	getHeader() Gets the header.
Peak	getNearestPeak(double mz, double mzTolPPM)
Peak[]	toPeaks() Gets the peaks.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

header

protected final SpectrumHeader header

The header.

spectrumData

protected SpectrumData spectrumData

The spectrum data.

Constructor Detail

Spectrum

public Spectrum(SpectrumHeader header,
                SpectrumData spectrumData)

Instantiates a new spectrum.

Parameters:

header - the header

spectrumData - the spectrum data

Method Detail

getHeader

public SpectrumHeader getHeader()

Gets the header.

Returns:

the header

getData

public SpectrumData getData()

Gets the data.

Returns:

the data

toPeaks

public Peak[] toPeaks()

Gets the peaks.

Returns:

the peaks

getNearestPeak

public Peak getNearestPeak(double mz,
                           double mzTolPPM)