io.github.msdk.datamodel

Enum ChromatogramType

java.lang.Object

java.lang.Enum<ChromatogramType>

io.github.msdk.datamodel.ChromatogramType

All Implemented Interfaces:

Serializable, Comparable<ChromatogramType>

public enum ChromatogramType
extends Enum<ChromatogramType>

Represents the type of chromatogram.

Enum Constant Summary

Enum Constants

Enum Constant and Description
BPC Base peak chromatogram (BPC).
MRM_SRM Multiple Reaction Monitoring (MRM) or Selected Reaction Monitoring (SRM).
SIC Single ion current (SIC) chromatogram.
TIC Total ion current (TIC) chromatogram.
UNKNOWN Unknown chromatogram type.
XIC Extracted-ion chromatogram (XIC).

Method Summary

Modifier and Type	Method and Description
static ChromatogramType	valueOf(String name) Returns the enum constant of this type with the specified name.
static ChromatogramType[]	values() Returns an array containing the constants of this enum type, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Detail

TIC

public static final ChromatogramType TIC

Total ion current (TIC) chromatogram. This is the summed intensity of all ions in each spectrum.

BPC

public static final ChromatogramType BPC

Base peak chromatogram (BPC). This is the intensity of the most intense ion in each spectrum.

XIC

public static final ChromatogramType XIC

Extracted-ion chromatogram (XIC). Also referred to as EIC or reconstructed-ion chromatogram (RIC). This is the intensity of one or more m/z values in each spectrum.

SIC

public static final ChromatogramType SIC

Single ion current (SIC) chromatogram. Only a narrow range of m/z values are detected in the analysis and a chromatogram similar to the XIC is generated.

MRM_SRM

public static final ChromatogramType MRM_SRM

Multiple Reaction Monitoring (MRM) or Selected Reaction Monitoring (SRM). A specific product ion of a specific parent ion is detected.

UNKNOWN

public static final ChromatogramType UNKNOWN

Unknown chromatogram type.

Method Detail

values

public static ChromatogramType[] values()

Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:

for (ChromatogramType c : ChromatogramType.values())
    System.out.println(c);

Returns:

an array containing the constants of this enum type, in the order they are declared

valueOf

public static ChromatogramType valueOf(String name)

Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

IllegalArgumentException - if this enum type has no constant with the specified name

NullPointerException - if the argument is null