io.github.msdk.datamodel

Enum MsScanType

java.lang.Object

java.lang.Enum<MsScanType>

io.github.msdk.datamodel.MsScanType

All Implemented Interfaces:

Serializable, Comparable<MsScanType>

public enum MsScanType
extends Enum<MsScanType>

Represents the type of MS scan. See also K. K. Murray, R. K. Boyd, M. N. Eberlin, G. J. Langley, L. Li and Y. Naito, Definitions of Terms Relating to Mass Spectrometry (IUPAC Recommendations 2013) Pure Appl. Chem. 2013, 85, 1515-1609.

Enum Constant Summary

Enum Constants

Enum Constant and Description
DIA Data Independent Acquisition (DIA) scan.
FULLMS Full MS scan.
MRM_SRM Multiple Reaction Monitoring (MRM) or Selected Reaction Monitoring (SRM) scan.
MSMS Fragmentation (tandem MS, or MS/MS) scan.
SIM Single ion monitoring (SIM) scan.
UNKNOWN Unknown MS scan type.

Method Summary

Modifier and Type	Method and Description
static MsScanType	valueOf(String name) Returns the enum constant of this type with the specified name.
static MsScanType[]	values() Returns an array containing the constants of this enum type, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Detail

FULLMS

public static final MsScanType FULLMS

Full MS scan.

MSMS

public static final MsScanType MSMS

Fragmentation (tandem MS, or MS/MS) scan.

SIM

public static final MsScanType SIM

Single ion monitoring (SIM) scan. This scan isolates a narrow range of m/z values before scanning, thus increasing the sensitivity in this range.

MRM_SRM

public static final MsScanType MRM_SRM

Multiple Reaction Monitoring (MRM) or Selected Reaction Monitoring (SRM) scan.

DIA

public static final MsScanType DIA

Data Independent Acquisition (DIA) scan.

UNKNOWN

public static final MsScanType UNKNOWN

Unknown MS scan type.

Method Detail

values

public static MsScanType[] values()

Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:

for (MsScanType c : MsScanType.values())
    System.out.println(c);

Returns:

an array containing the constants of this enum type, in the order they are declared

valueOf

public static MsScanType valueOf(String name)

Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

IllegalArgumentException - if this enum type has no constant with the specified name

NullPointerException - if the argument is null