io.github.msdk.datamodel

Class SimpleFeatureTableRow

java.lang.Object

io.github.msdk.datamodel.SimpleFeatureTableRow

All Implemented Interfaces:

FeatureTableRow

public class SimpleFeatureTableRow
extends Object
implements FeatureTableRow

Implementation of FeatureTableRow. Backed by a non-thread safe Map.

Constructor Summary

Constructors

Constructor and Description
SimpleFeatureTableRow(FeatureTable featureTable) Constructor for SimpleFeatureTableRow.

Method Summary

Modifier and Type	Method and Description
Integer	getCharge() Return the charge of this row
Feature	getFeature(Integer index) Return feature assigned to this row
Feature	getFeature(Sample sample) Return feature assigned to this row
FeatureTable	getFeatureTable() Returns the feature table where this feature table row belongs.
Double	getMz() Shortcut to return the m/z column value of this row
Float	getRT() Shortcut to return the m/z column value of this row
void	setCharge(Integer charge) Setter for the field charge.
void	setFeature(Sample sample, Feature feature) setFeature.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

SimpleFeatureTableRow

public SimpleFeatureTableRow(@Nonnull
                             FeatureTable featureTable)

Constructor for SimpleFeatureTableRow.

Parameters:

featureTable - a FeatureTable object.

Method Detail

getFeatureTable

@Nonnull
public FeatureTable getFeatureTable()

Returns the feature table where this feature table row belongs. Each feature table row is assigned to exactly one feature table.

Specified by:

getFeatureTable in interface FeatureTableRow

Returns:

the feature table.

getMz

public Double getMz()

Shortcut to return the m/z column value of this row

Specified by:

getMz in interface FeatureTableRow

Returns:

the m/z column value of this row.

getRT

public Float getRT()

Shortcut to return the m/z column value of this row

Specified by:

getRT in interface FeatureTableRow

Returns:

the m/z column value of this row.

getCharge

public Integer getCharge()

Return the charge of this row

Specified by:

getCharge in interface FeatureTableRow

Returns:

charge

setCharge

public void setCharge(@Nullable
                      Integer charge)

Setter for the field charge.

Parameters:

charge - a Integer object.

getFeature

public Feature getFeature(Sample sample)

Return feature assigned to this row

Specified by:

getFeature in interface FeatureTableRow

Parameters:

sample - a Sample object.

Returns:

a Feature object.

getFeature

public Feature getFeature(Integer index)

Return feature assigned to this row

Specified by:

getFeature in interface FeatureTableRow

Parameters:

index - a Integer object.

Returns:

a Feature object.

setFeature

public void setFeature(@Nonnull
                       Sample sample,
                       @Nonnull
                       Feature feature)

setFeature.

Parameters:

sample - a Sample object.

feature - a Feature object.