fr.profi.mzdb.io.reader.iterator

Class AbstractSpectrumSliceIterator

java.lang.Object

fr.profi.mzdb.io.reader.iterator.AbstractSpectrumSliceIterator

Direct Known Subclasses:

AbstractRunSliceIterator, SpectrumIterator, SpectrumRangeIterator.MsSpectrumRangeIteratorImpl

public abstract class AbstractSpectrumSliceIterator
extends Object

Field Summary

Fields

Modifier and Type	Field and Description
protected BoundingBoxIterator	boundingBoxIterator
protected BoundingBox	firstBB
protected com.almworks.sqlite4java.SQLiteStatement	statement

Constructor Summary

Constructors

Constructor and Description
AbstractSpectrumSliceIterator(AbstractSpectrumHeaderReader spectrumHeaderReader, AbstractDataEncodingReader dataEncodingReader, com.almworks.sqlite4java.SQLiteConnection connection, String sqlQuery)
AbstractSpectrumSliceIterator(AbstractSpectrumHeaderReader spectrumHeaderReader, AbstractDataEncodingReader dataEncodingReader, com.almworks.sqlite4java.SQLiteConnection connection, String sqlQuery, int msLevel, ISQLiteStatementConsumer stmtBinder)

Method Summary

Modifier and Type	Method and Description
void	closeStatement()
com.almworks.sqlite4java.SQLiteStatement	getStatement()
boolean	hasNext()
protected void	initBB()
void	remove()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

statement

protected final com.almworks.sqlite4java.SQLiteStatement statement

boundingBoxIterator

protected final BoundingBoxIterator boundingBoxIterator

firstBB

protected BoundingBox firstBB

Constructor Detail

AbstractSpectrumSliceIterator

public AbstractSpectrumSliceIterator(AbstractSpectrumHeaderReader spectrumHeaderReader,
                                     AbstractDataEncodingReader dataEncodingReader,
                                     com.almworks.sqlite4java.SQLiteConnection connection,
                                     String sqlQuery)
                              throws com.almworks.sqlite4java.SQLiteException,
                                     StreamCorruptedException

Throws:

com.almworks.sqlite4java.SQLiteException

StreamCorruptedException

AbstractSpectrumSliceIterator

public AbstractSpectrumSliceIterator(AbstractSpectrumHeaderReader spectrumHeaderReader,
                                     AbstractDataEncodingReader dataEncodingReader,
                                     com.almworks.sqlite4java.SQLiteConnection connection,
                                     String sqlQuery,
                                     int msLevel,
                                     ISQLiteStatementConsumer stmtBinder)
                              throws com.almworks.sqlite4java.SQLiteException,
                                     StreamCorruptedException

Throws:

com.almworks.sqlite4java.SQLiteException

StreamCorruptedException

Method Detail

getStatement

public com.almworks.sqlite4java.SQLiteStatement getStatement()

initBB

protected void initBB()

closeStatement

public void closeStatement()

hasNext

public boolean hasNext()

remove

public void remove()