fr.profi.mzdb.io.reader.iterator

Class LcMsRunSliceIterator

java.lang.Object

fr.profi.mzdb.io.reader.iterator.AbstractSpectrumSliceIterator

fr.profi.mzdb.io.reader.iterator.AbstractRunSliceIterator

fr.profi.mzdb.io.reader.iterator.LcMsRunSliceIterator

All Implemented Interfaces:

Iterator<RunSlice>

public class LcMsRunSliceIterator
extends AbstractRunSliceIterator
implements Iterator<RunSlice>

Field Summary

Fields inherited from class fr.profi.mzdb.io.reader.iterator.AbstractRunSliceIterator

bbHasNext, runSliceHeaderById, spectrumSliceBuffer

Fields inherited from class fr.profi.mzdb.io.reader.iterator.AbstractSpectrumSliceIterator

boundingBoxIterator, firstBB, statement

Constructor Summary

Constructors

Constructor and Description
LcMsRunSliceIterator(AbstractMzDbReader mzDbReader, com.almworks.sqlite4java.SQLiteConnection connection)
LcMsRunSliceIterator(AbstractMzDbReader mzDbReader, com.almworks.sqlite4java.SQLiteConnection connection, double minRunSliceMz, double maxRunSliceMz)

Method Summary

Methods inherited from class fr.profi.mzdb.io.reader.iterator.AbstractRunSliceIterator

initSpectrumSliceBuffer, next

Methods inherited from class fr.profi.mzdb.io.reader.iterator.AbstractSpectrumSliceIterator

closeStatement, getStatement, hasNext, initBB, remove

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface java.util.Iterator

forEachRemaining, hasNext, next, remove

Constructor Detail

LcMsRunSliceIterator

public LcMsRunSliceIterator(AbstractMzDbReader mzDbReader,
                            com.almworks.sqlite4java.SQLiteConnection connection)
                     throws com.almworks.sqlite4java.SQLiteException,
                            StreamCorruptedException

Throws:

com.almworks.sqlite4java.SQLiteException

StreamCorruptedException

LcMsRunSliceIterator

public LcMsRunSliceIterator(AbstractMzDbReader mzDbReader,
                            com.almworks.sqlite4java.SQLiteConnection connection,
                            double minRunSliceMz,
                            double maxRunSliceMz)
                     throws com.almworks.sqlite4java.SQLiteException,
                            StreamCorruptedException

Throws:

com.almworks.sqlite4java.SQLiteException

StreamCorruptedException